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- Vannutelli A, Ouangraoua A, Perreault JP. (2023) Toward a Better Understanding of G4 Evolution in the 3 Living Kingdoms. Evolutionary Bioinformatics. 2023 Dec 1 (19) 1–13. (Résumé/Abstract)
- C.R. Adkar-Purushothama, T. Sano, J.P. Perreault, S. M. Yanjarappa, F. Di Serio, J. A. Daròs. (2023) Fundamentals of Viroid Biology. Elsevier. (Résumé/Abstract)
- Lejault P, Prudent L, Terrier MP, Perreault JP. (2023) Small molecule chaperones facilitate the folding of RNA G-quadruplexes. Biochimie . 2023 Sep 2;S0300-9084(23). (Résumé/Abstract)
- Turcotte MA, Bolduc F, Vannutelli A, Mitteaux J, Monchaud D, Perreault JP. (2023) Development of a highly optimized procedure for the discovery of RNA G-quadruplexes by combining several strategies. Biochimie. 2023 Jul 19:S0300-9084(23)00175-X. doi: 10.1016. (Résumé/Abstract)
- Adkar-Purushothama CR, Sano T, Perreault JP. (2023) Hop Latent Viroid: A Hidden Threat to the Cannabis Industry. Viruses 2023, 15(3), 681. (Résumé/Abstract)
- Boudreault S, Durand M, Martineau C-A, Perreault J-P, Lemay G, Bisaillon M. (2022) Reovirus µ2 protein modulates host cell alternative splicing by reducing protein levels of U5 snRNP core components. Nucleic Acids Res . 2022 May 20;50(9):5263-5281. (Résumé/Abstract)
- Vannutelli A, Noele Schell LL, Perreault JP, Ouangraoua A. (2022) GAIA: G-quadruplexes in alive creature database. Nucleic Acids Res. 2022 Aug 16;gkac657. (Résumé/Abstract)
- Vannutelli A, Perreault JP, Ouangraoua A. (2022) G-quadruplex occurrence and conservation: more than just a question of guanine–cytosine content. NAR Genomics and Bioinformatics, Volume 4, Issue 1, March 2022. (Résumé/Abstract)
- Katsarou K, Adkar-Purushothama CR, Tassios E, Samiotaki M, Andronis C, Lisón P, Nikolaou C, Perreault JP, Kalantidis K. (2022) Revisiting the Non-Coding Nature of Pospiviroids. Cells; 11(2), 265. (Résumé/Abstract)
- Turcotte MA, Garant JM, Cossette-Roberge H, Perreault JP. (2021) Guanine Nucleotide-Binding Protein-Like 1 (GNL1) binds RNA G-quadruplex structures in genes associated with Parkinson’s disease. RNA Biology. Sep;18(9):1339-1353. (Résumé/Abstract)
- Adkar-Purushothama CR, Sridharan PI, Sano T, Perreault JP . (2021) sRNA Profiler: A User-Focused Interface for Small RNA Mapping and Profiling. Cells Jul 13;10(7):1771. (Résumé/Abstract)
- Xu D, Adkar-Purushothama CR, Lemoyne P, Perreault JP, Fall M. (2021) First report of Grapevine yellow speckle viroid 1 infecting grapevine (Vitis vinifera L.) in Canada. Plant Dis . 2021 Jun 7. (Résumé/Abstract)
- Adkar-Purushothama CR, Perreault JP. (2020) Impact of Nucleic Acid Sequencing on Viroid Biology. nt. J. Mol. Sci. 2020, 21(15), 5532. (Résumé/Abstract)
- Adkar-Purushothama CR, Bolduc F, Bru P, Perreault JP. (2020) Insights Into Potato Spindle Tuber Viroid Quasi- Species From Infection to Disease. Front Microbiol. 2020 Jul 3;11:1235. (Résumé/Abstract)
- Bolduc F, Turcotte MA, Perreault JP. (2020) The Small Nuclear Ribonucleoprotein Polypeptide A (SNRPA) binds to the G-quadruplex of the BAG-1 5'UTR. Biochimie. 2020 Jul 4;176:122-127. (Résumé/Abstract)
- Vannutelli A, Belhamiti S, Garant JM, Ouangraoua A, Perreault JP. (2020) Where are G-quadruplexes located in the human transcriptome?. NAR Genomics and Bioinformatics, Volume 2, Issue 2, June 2020, lqaa035,. (Résumé/Abstract)
- Adkar-Purushothama CR, Perreault JP. (2020) Current overview on viroid–host interactions. Wiley Interdiscip Rev RNA. 2020;11(2):e1570. (Résumé/Abstract)
- Jodoin R, Carrier JC, Rivard N, Bisaillon M, Perreault JP. (2019) G-quadruplex located in the 5'UTR of the BAG-1 mRNA affects both its cap-dependent and cap-independent translation through global secondary structure maintenance. Nucleic Acids Res 2019 47(19):10247–10266. (Résumé/Abstract)
- Cottilli P, Belda-Palazón B, Adkar-Purushothama CR, Perreault JP, Schleiff E, Rodrigo I, Ferrando A, Lisón P. (2019) Citrus exocortis viroid causes ribosomal stress in tomato plants. Nucleic Acids Res. 2019 Sep 19;47(16):8649-8661. (Résumé/Abstract)
- Brodeur CM, Thibault P, Durand M, Perreault JP, Bisaillon M. (2019) Dissecting the expression landscape of cytochromes P450 in hepatocellular carcinoma: towards novel molecular biomarkers. Genes Cancer. 10 (3-4) 97-108. (Résumé/Abstract)
- Boudreault S, Amero VES, Scott MS, Perreault JP, Bisaillon M. (2019) The Epstein-Barr virus EBNA1 protein modulates the alternative splicing of cellular genes. Virology J. 2019 Mar 4;16(1):29. (Résumé/Abstract)
- Adkar-Purushothama CR, Perreault JP. (2019) Suppression of RNA-Dependent RNA Polymerase 6 Favors the Accumulation of Potato Spindle Tuber Viroid in Nicotiana Benthamiana. Viruses 2019, 11(4), 345. (Résumé/Abstract)
- Jodoin R, Perreault JP. (2018) G-quadruplexes formation in the 5'UTRs of mRNAs associated with colorectal cancer pathways. PLoS One Dec 3;13(12). (Résumé/Abstract)
- Adkar-Purushothama CR, Sano T, Perreault JP. (2018) Viroid derived small RNA induces early flowering in tomato plants by RNA silencing. Mol. Plant. Pathol 19(11): 2446-2458. (Résumé/Abstract)
- Garant JM, Perreault JP, Scott MS. (2018) G4RNA screener web server: User focused interface for RNA G-quadruplex prediction. Biochimie 151; August 115-118. (Résumé/Abstract)
- Adkar-Purushothama CR, Perreault JP. (2018) Alterations of the viroid regions that interact with the host defense genes attenuate viroid infection in host plant. RNA Biology 15(7): 955-966. (Résumé/Abstract)
- Rouleau S, Garant JM, Bolduc F, Bisaillon M, Perreault JP. (2018) G-Quadruplexes influence pri-microRNA processing. RNA Biology 15 (2): 198-206. (Résumé/Abstract)
- Adkar-Purushothama CR, Bru P, Perreault JP. (2017) 3′ RNA ligase mediated rapid amplification of cDNA ends for validating viroid induced cleavage at the 3′ extremity of the host mRNA. Journal of Virological Methods, 250: 29-33. (Résumé/Abstract)
- Adkar-Purushothama CR, Pavithran SI, Perreault JP. (2017) Potato spindle tuber viroid infection triggers degradation of chloride channel protein CLC-b-like and Ribosomal protein S3a-like mRNAs in tomato plants. Scientific Reports 7, Article number: 8341. (Résumé/Abstract)
- Steger G, Riesner D, Maurel MC, Perreault JP. (2017) Viroid Structure. Viroids and Satellites. Oxford: Academic Press, 2017, pp. 63-70. (Résumé/Abstract)
- Garant JM, Perreault JP, Scott M. (2017) Motif independent identification of potential RNA G-quadruplexes by G4RNA screener. Bioinformatics, btx498. (Résumé/Abstract)
- Giguère T, Perreault JP. (2017) Classification of the Pospiviroidae based on their structural hallmarks. PLoS One Aug 4;12(8):e0182536. (Résumé/Abstract)
- Glouzon JPS, Perreault JP, Wang S. (2017) Structurexplor: A platform for the exploration of structural features of RNA secondary structures. Bioinfomatics, btx323. (Résumé/Abstract)
- Rouleau S, Jodoin R, Garant JM, Perreault JP. (2017) RNA G-Quadruplexes as Key Motifs of the Transcriptome. RNA G-Quadruplexes as Key Motifs of the Transcriptome. In: . Advances in Biochemical Engineering/Biotechnology. Springer, Berlin, Heidelberg. (Résumé/Abstract)
- Glouzon JP, Perreault JP, Wang S. (2017) The super-n-motifs model: a novel alignment-free approach for representing and comparing RNA secondary structures. Bioinformatics, btw773. (Résumé/Abstract)
- Rouleau S, Glouzon JP, Brumwell A, Bisaillon M, Perreault, JP. (2017) 3’UTR G-Quadruplexes regulate miRNA binding. RNA 23:1172-1179. (Résumé/Abstract)
- Song J, Perreault JP, Topisirovic I, Richard S . (2016) RNA G-quadruplexes and their potential regulatory roles in translation. Translation, 4:2, e1244031,.
- Bolduc F, Garant JM, Allard F, Perreault JP. (2016) Irregular G-quadruplexes found in the untranslated regions of human mRNAs influence translation. Journal of Biological Chemistry Oct 7;291(41):21751-21760.. (Résumé/Abstract)
- Boudreault S, Martenon-Brodeur C, Caron M, Garant JM, Tremblay MP, Armero VE, Durand M, Lapointe E, Thibault P, Tremblay-Létourneau M, Perreault JP, Scott MS, Lemay G, Bisaillon M. (2016) Global Profiling of the Cellular Alternative RNA Splicing Landscape during Virus-Host Interactions. PLoS One. Sep 6;11(9):e0161914. (Résumé/Abstract)
- Tremblay MP, Armero VE, Allaire A, Boudreault S, Martenon-Brodeur C, Durand M, Lapointe E, Thibault P, Tremblay-Létourneau M, Perreault JP, Scott MS, Bisaillon M. (2016) Global profiling of alternative RNA splicing events provides insights into molecular differences between various types of hepatocellular carcinoma. BMC Genomics. Aug 26;17:683. (Résumé/Abstract)
- Steger G, Perreault JP. (2016) Structure and Associated Biological Functions of Viroids. Adv Virus Res 94:141-172. (Résumé/Abstract)
- Adkar-Purushothama CR, Brosseau C, Gigure T, Sano T, Moffett P, Perreault, JP. (2015) Small RNA derived from the virulence modulating region of the Potato spindle tuber viroid silences callose synthase genes of tomato plants. The Plant Cell 27(8):2178-2194. (Résumé/Abstract)
- Adkar-Purushothama CR, Perreault JP, Sano T. (2015) Analysis of small RNA production patterns among the two potato spindle tuber viroid variants in tomato plants. Genomics Data 6:65-66. (Résumé/Abstract)
- Thandapani P, Song J, Gandin V, Cai Y, Rouleau SG, Garant JM, Boisvert FM, Yu Z, Perreault JP, Topisirovic I, Richard S. (2015) Aven recognition of RNA G-quadruplexes regulates translation of the mixed lineage leukemia protooncogenes. eLife 10.7554/eLife.06234. (Résumé/Abstract)
- Garant JM, Luce MJ, Scott MS, Perreault JP. (2015) G4RNA: an RNA G-quadruplex database. Database (Oxford) Jun 17;2015. pii: bav059.. (Résumé/Abstract)
- Rouleau SG, Beaudoin JD, Bisaillon M, Perreault JP. (2015) Small antisense oligonucleotides against G- quadruplexes: specific mRNA translational switches. Nucleic Acids Res 43 (1): 595-606. (Résumé/Abstract)
- Gigure T, Adkar-Purushothama CR, Perreault J-P. (2014) Comprehensive secondary structure elucidation of four genera of the family Pospiviroidae. PLoS One Jun 4;9(6):e98655. (Résumé/Abstract)
- Jodoin R, Bauer L, Garant JM, Mahdi Laaref A, Phaneuf F, Perreault JP. (2014) The folding of 5'-UTR human G-quadruplexes possessing a long central loop. RNA 20: 1129-1141. (Résumé/Abstract)
- Scarborough RJ, Lvesque MV, Boudrias-Dalle E, Chute IC, Daniels SM, Ouellette RJ, Perreault J-P, Gatignol A. (2014) A conserved target site in HIV-1 Gag RNA is accessible to inhibition by both an HDV ribozyme and a short hairpin RNA. Molecular Therapy - Nucleic Acids 29;3:e178. (Résumé/Abstract)
- Brosseau JP, Lucier JF, Lamarche AA, Shkreta L, Gendron D, Lapointe E, Thibault P, Paquet E, Perreault JP, Abou Elela S, Chabot B. (2014) Redirecting splicing with bifunctional oligonucleotides. Nucleic Acids Research 42(6):e40. (Résumé/Abstract)
- Gigure T, Adkar-Purushothama CR, Bolduc F, Perreault J-P. (2014) Elucidation of the structures of all members of the Avsunviroidae family. Molecular Plant Pathology 15:767-79. (Résumé/Abstract)
- Brosseau JP, Lucier JF, Nwilati H, Thibault P, Garneau D, Gendron D, Durand M, Couture S, Lapointe E, Prinos P, Klinck R, Perreault JP, Chabot B, Abou-Elela S. (2014) Tumor microenvironment-associated modifications of alternative splicing. RNA 20 (2): 189-201. (Résumé/Abstract)
- Glouzon JPS, Bolduc F, Wang S, Najmanovich RJ, Perreault JP. (2014) Deep-sequencing of the Peach Latent Mosaic Viroid Reveals New Aspects of Population Heterogeneity. PLoS One: 30;9(1) e87297. (Résumé/Abstract)
- Beaudoin JD, Jodoin R, Perreault JP. (2014) New scoring system to identify RNA G-quadruplex folding. Nucleic Acids Research 42(2):1209-23. (Résumé/Abstract)
- Scarborough RJ, Lvesque MV, Perreault JP, Gatignol A. (2014) Design and Evaluation of Clinically Relevant SOFA-HDV Ribozymes Targeting HIV RNA. Methods Mol Biol. 1103:31-43. (Résumé/Abstract)
- Ouellet J, Ananvoranich S and Perreault JP. (2014) Structural Analysis of Ribozymes. Encyclopedia of Analytical Chemistry. 1-18. (Résumé/Abstract)
- Beaudoin JD, Perreault JP. (2013) Exploring mRNA 3'-UTR G-quadruplexes: evidence of roles in both alternative polyadenylation and mRNA shortening. Nucleic Acids Research 41(11):5898-911. (Résumé/Abstract)
- Beaudoin JD, Jodoin R, Perreault JP. (2013) In-line probing of RNA G-quadruplexes. Methods 64(1): 79-87. (Résumé/Abstract)
- Prinos P, Klinck R, Venables JP, Perreault JP, Wellinger RJ, Abou Elela S, Chabot B. (2012) L'pissage alternatif : un gnrateur de diversit fonctionnelle dans les cancers. Mdecine Sciences Amrique 1 (4): 151. (Résumé/Abstract)
- Perreault JP, Lavoie F, Sullivan M. (2012) La recherche en sant dans le Rseau universitaire de Sherbrooke. Mdecine Sciences Amrique 1 (4): 3. (Résumé/Abstract)
- Rouleau SG, Jodoin R, Bisaillon M, Perreault JP. (2012) Programming a Highly Structured Ribozyme into Complex Allostery Using RNA Oligonucleotides. ACS Chem Biol 16;7(11):1802-6. (Résumé/Abstract)
- Xu W, Bolduc F, Hong N, Perreault J-P. (2012) The use of a combination of computer-assisted structure prediction and SHAPE probing to elucidate the secondary structures of five viroids. Molecular Plant Pathol 13: 666-676. (Résumé/Abstract)
- Lvesque D, Reymond C, Perreault JP. (2012) Characterization of the trans Watson-Crick GU base pair located in the catalytic core of the antigenomic HDV ribozyme. PLoS One 7(6):e40309. (Résumé/Abstract)
- Ben Aissa M, April M-C, Bergeron LJ, Perreault J-P, Levesque G. (2012) Silencing of amyloid precursor protein expression using a new engineered delta-ribozyme. Int J Alzheimers Dis: 947147. (Résumé/Abstract)
- Lévesque MV, Perreault J-P. (2012) Target Induced SOFA-HDV Ribozyme. Methods in Molecular Biology 848: 369-384. (Résumé/Abstract)
- Motard J, Rouxel R, Paun A, von Messling V, Bisaillon M, Perreault J-P. (2011) A Novel Ribozyme-Based Prophylaxis Inhibits Influenza A Virus Replication and Protects from Severe Disease. PLoS ONE 6: e27327. (Résumé/Abstract)
- Pelchat M, Perreault J-P. (2011) Viroids and Related RNA species. Book chapter in Fundamental Molecular Virology (2nd Edition).
- Lvesque MV, Rouleau SG, Perreault J-P. (2011) Selection of the most potent SOFA-HDV ribozymes for use in gene targeting. Nucl Acid Ther 21: 241-252. (Résumé/Abstract)
- Dub A, Bolduc F, Bisaillon M, Perreault J-P. (2011) Mapping studies of the Peach latent mosaic viroid reveal novel structural features. Molecular Plant Pathol. 12: 688-701. (Résumé/Abstract)
- Prinos P, Garneau D, Lucier J-F, Gendron D, Couture S, Boivin M, Brosseau J-P, Lapointe E, Thibault P, Tremblay K, Gervais-Bird J, Nwilati H, Venables JP, Klinck R, Chabot B, Perreault J-P, Wellinger RJ, Abou-Elela S. (2011) Alternative splicing of SYK regulates mitosis and cell survival. Nat Struct Mol Biol 18: 673-680. (Résumé/Abstract)
- D'Anjou F, Routhier S, Perreault J-P, Latil A, Bonnel D, Fournier I, Salzet M, Day R. (2011) Molecular validation of PACE4 as a target in prostate cancer. Transl Oncol 4:157-172. (Résumé/Abstract)
- Lain S, Scarborough RJ, Lvesque D, Didierlaurent L, Soye KJ, Mougel M, Perreault J-P, Gatignol A. (2011) In vitro and in vivo cleavage of HIV-1 RNA by new SOFA-HDV ribozymes and their potential to inhibit viral replication. RNA Biology 8: 343-353. (Résumé/Abstract)
- Reymond C, Lvesque D, Bisaillon M, Perreault J-P. (2010) Developing three-dimensional models of putative-folding intermediates of the HDV ribozyme. Structure 18:1608-1616. (Résumé/Abstract)
- Bergeron LJ, Perreault J-P, Abou Elela S. (2010) Short RNA duplexes guide sequence-dependent cleavage by human Dicer. RNA 16: 2464-2473. (Résumé/Abstract)
- Soulire MF, Perreault J-P, Bisaillon M. (2010) Insights into the molecular determinants involved in cap recognition by the vaccinia virus D10 decapping enzyme. Nucleic Acids Res. 38:7599-7610. (Résumé/Abstract)
- Beaudoin J-D, Perreault J-P. (2010) 5'-UTR G-quadruplex structures acting as translational repressors.. Nucleic Acids Res. 38:7022-7036. (Résumé/Abstract)
- Lvesque MV, Lvesque D, Brire FP, Perreault J-P. (2010) Investigating a New Generation of Ribozymes in Order to Target HCV. PLoS ONE 5: e9627. (Résumé/Abstract)
- Dub A, Baumstark T, Bisaillon M, Perreault J-P. (2010) The RNA strands of the plus and minus polarities of Peach latent mosaic viroid fold into different structures. RNA 16: 463-473. (Résumé/Abstract)
- Bolduc F, Hoareau C, St-Pierre P, Perreault J-P. (2010) In-depth sequencing of the siRNAs associated with Peach latent mosaic viroid infection. BMC Molecular Biology 11:16. (Résumé/Abstract)
- Brosseau J-P, Lucier J-F, Lapointe E, Durand M, Gendron D, Gervais-Bird J, Tremblay K, Perreault J-P, Elela SA. (2010) High-throughput quantification of splicing isoforms. RNA 16: 442-449. (Résumé/Abstract)
- Reymond C, Beaudoin J-D, Perreault J-P. (2009) Modulating RNA structure and catalysis: lessons from small cleaving ribozymes. Cell Mol Life Sci 66: 3937-3950. (Résumé/Abstract)
- Dub A, Bisaillon M, Perreault J-P. (2009) Identification of Proteins from Prunus persica That Interact with Peach Latent Mosaic Viroid. J Virol 83: 12057-12067. (Résumé/Abstract)
- Soulire MF, Perreault J-P, Bisaillon M. (2009) Characterization of the vaccinia virus D10 decapping enzyme provides evidence for a two-metal ion mechanism. Biochem J 420: 27-35. (Résumé/Abstract)
- St-Pierre P, Hassen IF, Thompson D, Perreault J-P. (2009) Characterization of the siRNAs associated with Peach latent mosaic viroid infection. Virology 383: 178182. (Résumé/Abstract)
- Reymond C, Bisaillon M, Perreault J-P . (2009) Monitoring of an RNA multistep folding pathway by isothermal titration calorimetry. Biophysical Journal 96: 132-140. (Résumé/Abstract)
- Soulire MF, Perreault J-P, Bisaillon M. (2008) Magnesium-binding studies reveal fundamental differences between closely related RNA triphosphatases. Nucleic Acids Research 36: 451-461. (Résumé/Abstract)
- Robichaud GA, Perreault J-P, Ouellette RJ. (2008) Development of an isoform-specific gene suppression system: the study of the human Pax-5B transcriptional element. Nucleic Acids Research 36: 4609-4620. (Résumé/Abstract)
- Beaudoin J-D, Perreault J-P. (2008) Potassium ions modulate a G-quadruplex-ribozymes activity. RNA 8: 1018-1025. (Résumé/Abstract)
- Motard J, Bolduc F, Thompson D, Perreault J-P . (2008) The Peach latent mosaic viroid replication initiation site is located at a universal position that appears to be defined by a conserved sequence. Virology 373: 363-375. (Résumé/Abstract)
- Soulire MF, Perreault J-P, Bisaillon M. (2008) Kinetic and Thermodynamic Characterization of the RNA Guanylyltransferase Reaction. Biochemistry 47: 38633874. (Résumé/Abstract)
- Nehdi A, Perreault J, Beaudoin J-D, Perreault J-P. (2007) A novel structural rearrangement of hepatitis delta virus antigenomic ribozyme. Nucleic Acids Research 35: 6820-6831. (Résumé/Abstract)
- Perreault J, Perreault J-P, Boire G. (2007) Ro-Associated Y RNAs in Metazoans: Evolution and Diversification. Molecular Biology Evolution 24: 1678-1689. (Résumé/Abstract)
- Lvesque D, Brire FP ,Perreault J-P. (2007) A Modern Mode of Activation for Nucleic Acid Enzymes. PLoS ONE 2: e673. (Résumé/Abstract)
- Lucier J-F, Perreault, J, Nol J-F, Boire G, Perreault J-P. (2007) RT Analyzer: a web application for finding new retrotransposons and detecting L1 retrotransposition signatures. Nucleic Acids Research 35(Web Server issue):W269-74. (Résumé/Abstract)
- Ullah A, Lvesque M, Robichaud G, Perreault J-P. (2007) Development of Ribozyme-Based Gene-Inactivations; The Example of the Hepatitis Delta Virus Ribozyme. Current Gene Therapy 7: 205-216. (Résumé/Abstract)
- Lvesque D, Beaudoin J-D, Roy S, Perreault J-P. (2007) In vitro selection and characterization of RNA aptamers binding thyroxine hormone. Biochem J 403: 129-138. (Résumé/Abstract)
- Fekih Hassen I, Massart S, Motard J, Roussel S, Parisi O, Kummert J, Fakhfakh H, Marrakchi M, Perreault J-P, Jijakli MH. (2007) Molecular features of new Peach Latent Mosaic Viroid variants suggest that recombination may have contributed to the evolution of this infectious RNA. Virology 360: 5057. (Résumé/Abstract)
- Reymond C, Ouellet J, Bisaillon M, Perreault J-P. (2007) Examination of the folding pathway of antigenomic hepatitis delta virus ribozyme reveals key interactions of the L3 loop. RNA 13: 44-54. (Résumé/Abstract)
- Lucier J-F, Bergeron LJ, Brire FP, Ouellette R, Elela SA, Perreault J-P. (2006) RiboSubstrates: a web application addressing the cleavage specificities of ribozymes in designated genomes. BMC Bioinformatics 7: 480. (Résumé/Abstract)
- Ananvoranich S, Perreault JP. (2006) Structural Analysis of Ribozymes. Encyclopedia of Analytical Chemistry. 1-12. (Résumé/Abstract)
- Elleuch A, Khouaja FD, Hamdi I, Bsais N, Perreault J-P, Marrakchi M, Fakhfakh H. (2006) Sequence analysis of three citrus viroids infecting a single Tunisian citrus tree (Citrus, reticulata, Clementine). Genetics and Molecular Biology 29: 705-710. (Résumé/Abstract)
- Fiola K, Perreault J-P, Cousineau B. (2006) Gene targeting in the gram-positive bacterium lactococcus lactis using various delta ribozymes. Applied and Environmental Microbiology 72: 869-879. (Résumé/Abstract)
- Nehdi A, Perreault J-P. (2006) Unbiased in vitro selection reveals the unique character of the self-cleaving antigenomic HDV RNA sequence. Nucleic Acids Research 34: 584-592. (Résumé/Abstract)
- Pelchat M, Perreault J-P. (2006) Viroids And Related RNA Species. Book chapter in Fundamental Molecular Virology (1st Edition) p.315-322.
- Bergeron LJ, Reymond C, Perreault J-P. (2005) Functional Characterization of the SOFA delta ribozyme. RNA 11: 1858-1868. (Résumé/Abstract)
- Landry P, Perreault, J-P. (2005) Identification of a Peach Latent Mosaic Viroid Hairpin Able To Act as a Dicer-Like Substrate. Journal of Virology: 6540-6543. (Résumé/Abstract)
- Perreault J, Nol J-F, Brire F, Cousineau B, Lucier J-F, Perreault J-P, Boire G. (2005) Retropseudogenes derived from the human Ro/SS-A autoantigen-associated hY RNAs. Nucleic Acids Research 33: 2032-2041. (Résumé/Abstract)
- Bergeron, LJ, Perreault J-P . (2005) Target-dependent on/off switch increases ribozyme fidelity. Nucleic Acids Research 33: 1240-1248. (Résumé/Abstract)
- Elleuch A, Marrakchi M, Fakhfakh H, Lvesque D, Perreault J-P, Bessais N. (2004) Interactions between Citrus Cachexia Viroid and Closely Related Sequence Variants May Impair Expression of Cachexia Symptoms. ISHS Acta Horticulturae 657: XIX International Symposium on Virus and Virus-like Diseases of Tempe. (Résumé/Abstract)
- Landry P, Thompson D, Perreault J-P. (2004) The role of viroids in gene silencing: the model case of Peach latent mosaic viroid. Can. J. Plant Pathol 26: 31-38. (Résumé/Abstract)
- Ouellet J, Perreault J-P. (2004) Cross-linking experiments reveal the presence of novel structural features between a hepatitis delta virus ribozyme and its substrate. RNA 10: 1059-1072. (Résumé/Abstract)
- Pelchat M, Perreault, J-P. (2004) Binding site of Escherichia coli RNA polymerase to an RNA promoter. Biochemical and Biophysical Research Communications 319: 636-642. (Résumé/Abstract)
- D Anjou F, Bergeron LJ, Larbi NB, Fournier I, Salzet M, Perreault J-P, Day R . (2004) Silencing of SPC2 Expression Using an Engineered delta Ribozyme in the Mouse BTC-3 Endocrine Cell Line. J Biol Chem 279 : 14232-14239. (Résumé/Abstract)
- Bergeron LJ, Ouellet J, Perreault, J-P. (2003) Ribozyme-Based Gene-Inactivation System Require A Fine Comprehension of their Substrate Specificities; the Case of Delta Ribozyme. Current Medicinal Chemistry 10 : 1241-1253. (Résumé/Abstract)
- Côté F, De la Pena M, Flores R, Perreault J-P. (2003) Ribozyme reactions of viroids. VIROIDS: 350-356. (Résumé/Abstract)
- Elleuch A, Marrakchi M, Lévesque D, Bessais N, Perreault J-P, Fakhfakh H. (2003) Molecular Variability of Citrus Exocortis Viroid in a Single Naturally Infected Citrus Tree. Plant. Protect. Sci 39: 139-145. (Résumé/Abstract)
- Bussire F, Led S, Girard M, Hroux M, Perreault J-P, Matton DP. (2003) Development of an efficient cis-acting ribozyme cassette in plants. The Plant Biotechnology Journal 1 : 423-435. (Résumé/Abstract)
- Deschnes P, Ouellet J, Perreault J, Perreault J-P. (2003) Formation of the P1.1 pseudoknot is critical for both the cleavage activity and substrate specificity of an antigenomic trans-acting hepatitis delta ribozyme. Nucleic Acids Research 31: 2087-2096. (Résumé/Abstract)
- Elleuch A, Marrakchi M, Perreault J-P, Fakhfakh H. (2003) First report of Australian grapevine viroid from the mediterranean region. Journal of Plant Pathology 85: 51-55. (Résumé/Abstract)
- Pelchat M, Rocheleau L, Perreault J, Perreault J-P. (2003) SubViral RNA: a database of the smallest known auto-replicable RNA species. Nucleic Acids Research 31: 444-445. (Résumé/Abstract)
- Bergeron LJ, Perreault J-P. (2002) Development and comparison of procedures for the selection of delta ribozyme cleavage sites within the hepatitis B virus. Nucleic Acids Research 30: 4682-4691. (Résumé/Abstract)
- Elleuch A, Fakhfakh H, Pelchat M, Landry P, Marrakchi M, Perreault J-P. (2002) Sequencing of Australian Grapevine Viroid and Yellow Speckle Viroid isolated from a Tunisian grapevine without passage in an indicator plant. Eur J Plant Pathol 108: 815-820. (Résumé/Abstract)
- Fiola K, Perreault J-P. (2002) Kinetic and binding analysis of the catalytic involvement of ribose moities of a trans-acting delta ribozyme. J Biol Chem 277: 26508-26516. (Résumé/Abstract)
- Pelchat M, Grenier C, Perreault J-P. (2002) Characterization of a Viroid-Derived RNA Promoter for the DNA-Dependent RNA Polymerase from Escherichia coli. Biochemistry 41: 6561-6571. (Résumé/Abstract)
- Lvesque D, Choufani S, Perreault J-P . (2002) Delta ribozyme benefits from a good stability in vitro that becomes outstanding in vivo. RNA 8: 464-477. (Résumé/Abstract)
- Ananvoranich S, Fiola K, Ouellet J, Deschnes P, Perreault J-P. (2001) Kinetic analysis of bimolecular hepatitis delta ribozyme. Methods Enzymol 341: 553-566. (Résumé/Abstract)
- Pelchat M, Ct F, Perreault J-P. (2001) Study of the polymerization step of the rolling circle replication of peach latent mosaic viroid. Arch Virol 146: 1753-1763. (Résumé/Abstract)
- Ct F, Lvesque D, Perreault J-P . (2001) Natural 2`,5`-phosphodiester bonds found at the ligation sites of peach latent mosaic viroid. J Virol 75: 19-25. (Résumé/Abstract)
- Poisson V, Mnard DB, Frost E, Perreault J-P. (2000) A Canadien isolate of hepatitis delta virus. Can J Gastro Enterol 14 Suppl B: 36B-40B. (Résumé/Abstract)
- Pelchat M, Lvesque D, Ouellet J, Laurendeau S, Lvesque S, Lehoux J, Thompson DA, Eastwell KC, Skrzeczkowski LJ, Perreault J-P. (2000) Sequencing of peach latent mosaic viroid variants from nine peach cultivars shows that this RNA folds into a complexe secondary structure. Virology 271: 37-45. (Résumé/Abstract)
- Ananvoranich S, Perreault J-P. (2000) The Kinetics and Magnesium Requirements for the Folding of Antigenomic delta Ribozymes. Biochem Biophys Res Commun 270: 600607. (Résumé/Abstract)
- Bussire F, Ouellet J, Ct F, Lvesque D, Perreault J-P. (2000) Mapping in Solution Shows the Peach Latent Mosaic Viroid To Possess a New Pseudoknot in a Complex, Branched Secondary Structure. J Virol 74: 2647-2654. (Résumé/Abstract)
- Deschnes P, Lafontaine DA, Charland S, Perreault J-P. (2000) Nucleotides -1 to -4 of hepatitis delta ribozyme substrate increase the specificity of ribozyme cleavage. Antisense & Nucleic Acid Drug Dev 10: 53-61. (Résumé/Abstract)
- Pelchat M, Deschnes P, Perreault J-P. (2000) The database of the smallest known auto-replicable RNA species: viroids and viroid-like RNAs. Nucleic Acids Research 28: 179-180. (Résumé/Abstract)
- Le D� S, Desch�nes P, Ananvoranich S, Perreault J-P. (1999) Review of the substrate specificity for delta ribozyme cleavage. Nucleic Acids Symp Series 41: 24-26.
- Lafontaine DA, Ananvoranich S, Perreault J-P. (1999) Presence of a coordinated metal ion in a trans-acting antigenomic delta ribozyme. Nucleic Acids Research 27: 3236-3243. (Résumé/Abstract)
- Bussire F, Lehoux J, Thompson DA, Skrzeczkowski L J, Perreault J-P. (1999) Subcellular localization and rolling circle replication of Peach Latent Mosaic Viroid: Hallmarks of Group A viroids. J Virol 73: 6353-6360. (Résumé/Abstract)
- Ananvoranich S, Lafontaine DA, Perreault J-P. (1999) Mutational analysis of the antigenomic trans-acting delta ribozyme: the alterations of the middle nucleotides located on the P1 stem. Nucleic Acids Research 27: 1473-1479. (Résumé/Abstract)
- Roy G, Ananvoranich S, Perreault J-P. (1999) Delta ribozyme has the ability to cleave in trans an mRNA. Nucleic Acids Research 27: 942-948. (Résumé/Abstract)
- Lafontaine DA, Deschnes P, Bussire F, Poisson V, Perreault J-P. (1999) The viroid and viroid-like RNA database. Nucleic Acids Research 27: 186-187. (Résumé/Abstract)
- Mercure S, Lafontaine D, Ananvoranich S, Perreault J-P. (1998) Kinetic analysis of delta ribozyme cleavage. Biochemistry 37: 16975-16982. (Résumé/Abstract)
- Lafontaine DA, Mercure S, Perreault J-P. (1998) Identification of a Crohn`s disease specific transcript with potential as a diagnostic marker. Gut 42: 878-882. (Résumé/Abstract)
- Ananvoranich S, Perreault J-P. (1998) Substrate specificity of delta ribozyme cleavage. J Biol Chem 273: 13182-13188. (Résumé/Abstract)
- Lafontaine DA, Mercure S, Poisson V, Perreault J-P. (1998) The viroid and viroid-like RNA database. Nucleic Acids Research 26: 190-191. (Résumé/Abstract)
- Roy G, Ananvoranich S, Perreault J-P. (1997) Design of ribozymes to selectively cleave the human hepatitis delta virus mRNA. Nucleic Acids Symp series 36: 893-895.
- Poisson V, Mercure S, Lafontaine D, Perreault J-P. (1997) Development of a bimolecular delta ribozyme. Nucleic Acids Symp series 36: 83-85.
- Mercure S, Lafontaine D, Roy G, Perreault J-P. (1997) Le motif autocatalytique delta de l'hpatite humaine. Mdecine Science 13: 662-669.
- Ct F, Perreault J-P. (1997) Peach latent mosaic viroid is locked by a 2`,5`-phosphodiester bond produced by in vitro self-ligation. J Mol Biol 273: 533-543. (Résumé/Abstract)
- Roy G, Mercure S, Beuvon F, Perreault J-P. (1997) Characterization of stable RNAs from the resected intestinal tissues of individuals with either Crohn`s disease or ulcerative colitis. Biochem Cell Biol 75: 789-794. (Résumé/Abstract)
- Lafontaine D, Mercure S, Perreault J-P. (1997) Update of the viroid and viroid-like sequence database: addition of a hepatitis delta virus RNA section. Nucleic Acids Research 25: 123-125. (Résumé/Abstract)
- Bussire F, Lafontaine D, Perreault J-P. (1996) Compilation and analysis of viroid and viroid-like RNA sequences. Nucleic Acids Research 24: 1793-1798. (Résumé/Abstract)
- Bussiere F, Lafontaine D, Cote F, Beaudry D, Perreault J-P. (1995) Evidence for a model ancestral viroid. Nucleic Acids Symp series 33: 143-144.
- Beaudry D, Perreault J-P. (1995) An efficient strategy for the synthesis of circular RNA molecules. Nucleic Acids Research 23: 3064-3066. (Résumé/Abstract)
- Lafontaine D, Beaudry D, Marquis P, Perreault J-P. (1995) Intra- and intermolecular nonenzymatic ligations occur within transcripts derived from the peach latent mosaic viroid. Virology 212: 705-709. (Résumé/Abstract)
- Bussire F, Perreault J-P. (1995) On the road to a DNA-protein world. RNA 1: 451-452. (Résumé/Abstract)
- Beaudry D, Bussire F, Lareau F, Lessard C, Perreault J-P. (1995) The RNA of both polarities of the peach latent mosaic viroid self-cleaves in vitro solely by single hammerhead structures. Nucleic Acids Research 23: 745-52. (Résumé/Abstract)